• Kawulok Michał, Kawulok Jolanta, Smołka Bogdan, Celebi M. Emre (red.): Super-resolution for remote sensing, 2024, Springer, ISBN 978-3-031-68106-6, [978-3-031-68105-9, 978-3-031-68108-0], 384 s. Przejdź do dokumentu po identyfikatorze cyfrowym DOI:10.1007/978-3-031-68106-6 Otwiera się w nowej karcie

• Marczyk Michał, Mika Justyna, Tobiasz Joanna, Polańska Joanna (red.): Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme, 2024, Politechnika Śląska, 79 s.

• Mika Justyna, Tobiasz Joanna, Marczyk Michał, Bajkacz Sylwia (red.): Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today, Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, 189 s.

• Bargieła Alicja, Mika Justyna: Adopting the linear regression model to characterize the diversity profiles of TCR repertoires, W: BioMeeting 2024, Kroczyce, May 24-26 2024. Book of abstracts, 2024, s. 14-14

• Ciebiada Maciej, Pietrowska Monika, Polańska Joanna: Modulowanie wydzielania małych pęcherzyków zewnątrzkomórkowych, W: XI Śląskie Spotkania Naukowe, 17-19 maja 2024, Ustroń, Numer artykułu: II-8, 2024, s. 31-31

• Cojg Urszula, Suwalska Aleksandra: Enhancing COVID-19 chest X-Ray classification via artificial extension of the dataset with variational autoencoder, W: BioMeeting 2024, Kroczyce, May 24-26 2024. Book of abstracts, 2024, s. 23-23

• Daszkiewicz Marta, Marczyk Michał: Quantitative evaluation of image quantization in histopathological analysis using gaussian mixture modeling, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 39-39

• Fochtman Daniel, Gawin Marta, Han Jie, Marczak Łukasz, Wojakowska Anna, Polańska Joanna, Whiteside Theresa, Pietrowska Monika: Development of a targeted MS-based quantitative assay for assessment of melanoma progression, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: I-15, 2024, s. 80-81

• Gawliczek Marta, Bartel Kinga, Chojecka Oliwia, Paluch Mateusz, Swoboda Natalia, Kowolik Jakub, Mielańczyk Anna, Bal Artur: Dedicated software for calculating critical micelle concentration, W: National scientific conference “Knowledge – Key to Success” VIII edition. 27 January 2024. Book of abstracts / Firaza Agnieszka, Kępczak Norbert, Byczkowska Paulina (red.), 2024, Promovendi, ISBN 978-83-967915-5-9, s. 60-60

• Gil Jarosław, Łabaj Wojciech, Polański Andrzej: Adaptation of birth rate in deterministic model for cancer cells population evolution scenario, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 9-9

• Kalisz Seweryn, Marczyk Michał, Fagas Rafał, Polańska Joanna: Application of artificial intelligence models to the task of real text detection, W: EuroScience Open Forum 2024 : [book of abstracts], Numer artykułu: 0454, 2024, s. 513-514

• Kalisz Seweryn, Marczyk Michał, Fagas Rafał, Polańska Joanna: Detekcja tekstu scenicznego z wykorzystaniem modeli głębokiego uczenia, W: Ogólnopolska Konferencja Naukowa Krajowej Reprezentacji Doktorantów. Referaty / Mroskowiak Aleksandra (red.), 2024, s. 54-54

• Kawalec Tomasz, Polańska Joanna: Can we predict glycated hemoglobin (HbA1c) level in children with type 1 diabetes?, W: Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today / Mika Justyna [i in.] (red.), Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, s. 137-147, DOI:10.34918/89996

• Kawalec Tomasz, Polańska Joanna: Predictive model for glycated hemoglobin level in children with type 1 diabetes, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 8-8

• Kuliś Karolina, Szlauer-Stefanska Anastazja, Kamińska-Winciorek Grażyna, Polańska Joanna: Machine learning methods to trace changes over time of series of images, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 13-13

• Kusnik Damian, Smolk Milena, Smołka Bogdan: Impulsive noise resilient mean shift filtering for effective color image enhancement, W: 2024 IEEE Tenth International Conference on Communications and Electronics (ICCE). IEEE ICCE 2024, Da Nang, Vietnam, July 31 – August 2, 2024, 2024, Institute of Electrical and Electronics Engineers, ISBN 979-8-3503-7979-2, s. 532-537, DOI:10.1109/ICCE62051.2024.10634651

• Laber Viviana, Polańska Joanna: Assessment of feature filtering methods for transcriptomic data classification tools, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 18-18

• Łabaj Wojciech: Adaptation simulated data to the characteristics of real sequencing data based on VAF statistic, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 16-16

• Marczyk Michał, Tobiasz Joanna, Rozenblit Mariya, Volk Robert J. , Győrffy Balázs, Pusztai Lajos, Giordano Sharon H. :  Development of ASSESS, a breast cancer decision support tool using SEER data and treatment benefit estimates from randomized adjuvant therapy trials​,, W: San Antonio Breast Cancer Symposium. SABCS 2024, San Antonio, December 10-13, 2024, Numer artykułu: P4-02-04, 2024, s. 1965-1966

• Marczyk Michał, Schoser Benedikt, Santorelli Filippo M., Tupler Rossella, Polańska Joanna: AI-based virtual pathologist for quantitative analysis of H&E stained muscle biopsy images to support efficient diagnosis of muscular dystrophy, W: EuroScience Open Forum 2024 : [book of abstracts], Numer artykułu: 0425, 2024, s. 423-424

• Merta Julia, Marczyk Michał: Pre- and post-processing methods for improved unsupervised cell detection in HE-stained tissue images, W: Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today / Mika Justyna [i in.] (red.), Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, s. 160-173, DOI:10.34918/89998

• Merta Julia, Marczyk Michał: Unsupervised method for the detection of single cells in histopathological images, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 36-36

• Nowak Jakub, Laber Viviana, Klaja Bartosz, Filipek Łukasz, Piątek Kacper, Bambynek Martyna , Węgrzyn Magdalena, Student Sebastian, Frąckiewicz Mariusz, Psiuk-Maksymowicz Krzysztof: Comparative analysis of MRI brain image denoising methods using neural networks and traditional image processing techniques for subcortical region segmentation, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: IV-8, 2024, s. 152-152, łączna liczba autorów: 12

• Nowak-Kiczmer Maria, Papież Anna, Mika Justyna, Tobiasz Joanna, Żyła Joanna, Pochrzęst Marcin, Augustyniak Urszula, Miczkowski Krzysztof, Papież Maciej, Polańska Joanna: Assessment of neuropsychiatric complications among patients with mild and moderate course of SARS-CoV-2 infection based on Coronavirus Neurological Impairment (CORNELIA) test platform, W: Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today / Mika Justyna [i in.] (red.), Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, s. 105-122, DOI:10.34918/89994, łączna liczba autorów: 17

• Ochocki Marcel, Marczyk Michał: Comparative study of state-of-the-art methods for detecting cell nuclei in he-stained histological images, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: IV-4, 2024, s. 148-148

• Ochocki Marcel, Żyła Joanna: Exploring the impact of varied parameters on Gaussian mixture model clustering efficiency, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 17-17

• Pas Bartosz, Kalisz Seweryn, Marczyk Michał: Classification of lung diseases with the use of artifical intelligence methods, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 40-40

• Pawlus Benedykt, Smołka Bogdan, Kawulok Jolanta, Kawulok Michał: Coupling deep and handcrafted features to assess smile genuineness, W: Real-time image processing and deep learning 2024, 22-23 April 2024, National Harbor, Maryland, United States / Kehtarnavaz Nasser , Shirvaikar Mukul V. (red.), Proceedings of SPIE: The International Society for Optical Engineering, vol. 13034, Numer artykułu: 1303406, 2024, SPIE – The International Society for Optics and Photonics, ISBN 9781510673878 , DOI:10.1117/12.3013815

• Piorecki Lukasz , Socha Marek, Verdú-Díaz José, Diaz-Manera Jordi, Polańska Joanna: Compass-NMD: automated lower body bone segmentation and labeling using convolutional neural networks, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: IV-1, 2024, s. 145-145

• Polańska Joanna: Radiomics, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: L-29, 2024, s. 55-55

• Radwan Ewa, Savarese Marco, Tupler Rossella , Polańska Joanna: Data sparseness and dimensionality reduction in cluster analysis – the study of transcriptomic heterogeneity among patients with muscular dystrophies, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 10-10

• Rotarska-Mizera Anna, Myśliwiec Artur, Wolak Magdalena, Seget Sebastian, Chyra-Jach Dorota, Jarosz-Chobot Przemysława, Polańska Joanna: Can we establish the Polish national childhood T1DM registry based on the National Health Fund (NFZ) database? – the Upper Silesia example, W: Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today / Mika Justyna [i in.] (red.), Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, s. 94-105, DOI:10.34918/89993

• Smołka Bogdan, Kusnik Damian, Smolka Milena, Kawulok Michał, Cyganek Boguslaw: Color image denoising: a hybrid approach for mixed Gaussian and impulsive noise, W: Real-time image processing and deep learning 2024, 22-23 April 2024, National Harbor, Maryland, United States / Kehtarnavaz Nasser , Shirvaikar Mukul V. (red.), Proceedings of SPIE: The International Society for Optical Engineering, vol. 13034, Numer artykułu: 1303405, 2024, SPIE – The International Society for Optics and Photonics, ISBN 9781510673878 , DOI:10.1117/12.3013424

• Socha Marek, Verdu-Diaz Jose, Manera Jordi Diaz , Volker Straub, Polańska Joanna: Skin segmentation from the lower leg MRI of patients with muscle dystrophy, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 37-37

• Strzoda Tomasz, Najim Mustafa , Cruz-Garcia Lourdes , Badie Christophe , Polańska Joanna: Targeted vs. whole-genome alignment – does it matter?, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 15-15

• Suwalska Aleksandra, Topf Ana, Vandroux Marie, Savarese Marco, Laporte Jocelyn, Straub Volker, Santorelli Filippo M., Tupler Rossella, Polańska Joanna: Compass-nmd: genetic stratification of patients with hereditary neuromuscular diseases for accurate diagnosis and improved life quality, W: EuroScience Open Forum 2024 : [book of abstracts], Numer artykułu: 0407 , 2024, s. 417-418

• Suwalska Aleksandra, Topf Ana, Vandroux Marie, Savarese Marco, Laporte Jocelyn, Straub Volker, Santorelli Filippo M., Tupler Rossella, Polańska Joanna: Compass-NMD: stratification of neuromuscular disorder patients using novel gene scoring and deep learning, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: IV-2, 2024, s. 146-146

• Tobiasz Joanna, Polańska Joanna: Can machine learning reveal hidden subtypes of breast cancer?, W: EuroScience Open Forum 2024 : [book of abstracts], Numer artykułu: 0491 , 2024, s. 428-429

• Tuszyński Jacek: On the energy-based limitations of the information capacity and information processing rates in the human brain, W: Pathways to the Origin and Evolution of Meanings in the Universe / Sharov Alexei A., Mikhailovsky George E. (red.), 2024, John Wiley & Sons, ISBN 978-1-119-86509-4, s. 345-361, DOI:10.1002/9781119865667.ch16

• Widzisz Karolina, Kania Mateusz, Żyła Joanna, Polański Andrzej: Binary assignment of somatic mutation profiles to genetic pathways for robust classification of cancers, W: Recent advances in computational oncology and personalized medicine. Vol. 4, Building the world of tomorrow, today / Mika Justyna [i in.] (red.), Monografia / Politechnika Śląska, nr 1057, 2024, Politechnika Śląska, ISBN 978-83-7880-999-9, s. 32-53, DOI:10.34918/89989

• Widzisz Karolina, Kania Mateusz, Żyła Joanna, Polański Andrzej: Binary encoding for robust clusterization of somatic mutation profiles of cancer DNA-sequencing data, W: Computational oncology and personalized medicine – building world of tomorrow, today. COPM2024, Gliwice, May 22th, 2023. Book of abstracts. Conference programme / Marczyk Michał [i in.] (red.), 2024, Politechnika Śląska, s. 11-11

• Zamojski Dawid, Marczyk Michał: Application of natural language processing models in supporting planning of infertility treatment – a preliminary study, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: IV-3, 2024, s. 147-147

• Zamojski Dawid, Marczyk Michał, Polańska Joanna: Przegląd metod oceny ryzyka w procesie diagnostyki oraz leczenia niepłodności, W: XI Śląskie Spotkania Naukowe, 17-19 maja 2024, Ustroń, Numer artykułu: IV-4, 2024, s. 68-68

• Zebrowska Aneta, Mika Justyna, Widłak Piotr, Modal Sujan, Gawin Marta, Najjar Yana, Polańska Joanna, Whiteside Theresa, Pietrowska Monika: Distinct proteomic profiles of t cell-derived small extracellular vesicles from plasma of melanoma patients and healthy donors, W: XXVIII Gliwice Scientific Meetings, Gliwice, November 21-22, 2024, Numer artykułu: I-13, 2024, s. 77-78

• Adeleke Victoria T., Ebenezer Oluwakemi, Lasich Madison, Tuszyński Jacek, Robertson Scott, Mugo Samuel M.: Design and optimization of molecularly imprinted polymer targeting epinephrine molecule: a theoretical approach, Polymers, MDPI, vol. 16, nr 16, 2024, Numer artykułu: 2341, DOI:10.3390/polym16162341

• Bal Artur: Improving the robustness of the Theil-Sen estimator using a simple heuristic-based modification, Symmetry, MDPI, vol. 16, nr 6, 2024, Numer artykułu: 698, s. 1-16, DOI:10.3390/sym16060698

• Chełmińska Marta, Specjalski Krzysztof, Jassem Ewa, Polańska Joanna, Kita Karolina, Górska Lucyna, Didkowska Joanna, Wojciechowska Urszula, Nittner-Marszalska Marita, Kuna Piotr: Venom immunotherapy does not affect survival of patients with malignant tumor in Poland, Journal of Clinical Medicine, MDPI, vol. 13, nr 11, 2024, Numer artykułu: 3152, s. 1-9, DOI:10.3390/jcm13113152, łączna liczba autorów: 29

• Coombe Dennis, Wallace Cooper, Rezania Vahid, Tuszyński Jacek: Computational analysis of upscaled fibrotic liver multi-lobule flows and metabolism, Processes, MDPI, vol. 12, nr 9, 2024, Numer artykułu: 1789, s. 1-30, DOI:10.3390/pr12091789

• Costa Frederico P., Wiedenmann Bertram, Schöll Eckehard, Tuszyński Jacek: Emerging cancer therapies: targeting physiological networks and cellular bioelectrical differences with non-thermal systemic electromagnetic fields in the human body – a comprehensive review, Frontiers in Network Physiology, Frontiers Media S.A., vol. 4, 2024, Numer artykułu: 1483401, DOI:10.3389/fnetp.2024.1483401

• Denkert Carsten, Schneeweiss Andreas, Rey Julia, Karn Thomas, Hattesohl Akira, Weber Karsten E., Rachakonda Sivaramakrishna, Braun Michael, Huober Jens, Marczyk Michał: Molecular adaptation to neoadjuvant immunotherapy in triple-negative breast cancer, Cell Reports Medicine, Cell Press, vol. 5, nr 11, 2024, Numer artykułu: 101825, s. 1-19, DOI:10.1016/j.xcrm.2024.101825, łączna liczba autorów: 38

• Di Gregorio Elisabetta, Staelens Michael, Hosseinkhah Nazanin, Karimpoor Mahroo, Liburd Janine, Lim Lew, Shankar Karthik, Tuszyński Jacek: Raman spectroscopy reveals photobiomodulation-induced α-Helix to β-sheet transition in tubulins: potential implications for Alzheimer’s and other neurodegenerative diseases, Nanomaterials, MDPI, vol. 14, nr 13, 2024, Numer artykułu: 1093, s. 1-21, DOI:10.3390/nano14131093

• Duller Stefanie, Vrbancic Simone, Szydłowski Łukasz, Mahnert Alexander, Blohs Marcus, Predl Michael, Kumpitsch Christina, Zrim Verena, Högenauer Christoph, Kościółek Tomasz: Targeted isolation of Methanobrevibacter strains from fecal samples expands the cultivated human archaeome, Nature Communications, Nature, vol. 15, nr 1, 2024, Numer artykułu: 7593, s. 1-16, DOI:10.1038/s41467-024-52037-7, łączna liczba autorów: 23

• Ebenezer Oluwakemi, Oyebamiji Abel Kolawole, Olanrewaju Adesoji Alani, Akinola Omowumi Temitayo, Afolabi Samson Olusegun, Olaseinde Ayodeji Arnold, Tuszyński Jacek: Designing of potential siRNA molecules for African norovirus gene silencing: a computational approach, Pharmacological Research – Reports, vol. In press, 2024, Numer artykułu: 100021, DOI:10.1016/j.prerep.2024.100021 [w druku]

• Foldi Julia, Blenman Kim R. M., Marczyk Michał, Gunasekharan Vignesh, Polanska Alicja, Gee Renelle, Davis Mya, Kahn Adriana M., Silber Andrea, Pusztai Lajos: Peripheral blood immune parameters, response, and adverse events after neoadjuvant chemotherapy plus durvalumab in early-stage triple-negative breast cancer, Breast Cancer Research and Treatment, vol. 208, 2024, 369–377, DOI:10.1007/s10549-024-07426-3

• Frąckiewicz Mariusz, Palus Henryk: Application of fractional derivatives in image quality assessment indices, Applied Numerical Mathematics, Elsevier, vol. 204, 2024, s. 101-110, DOI:10.1016/j.apnum.2024.06.005

• Frąckiewicz Mariusz, Machalica Łukasz, Palus Henryk: New combined metric for full-reference image quality assessment, Symmetry, MDPI, vol. 16, nr 12, 2024, s. 1-22, DOI:10.3390/sym16121622

• Freedman Holly, Tuszyński Jack A.: Study of the myosin relay helix peptide by molecular dynamics simulations, pump-probe and 2D infrared spectroscopy, International Journal of Molecular Sciences, MDPI, vol. 25, nr 12, 2024, Numer artykułu: 6406, s. 1-23, DOI:10.3390/ijms25126406

• Gunasekharan Vignesh, Lin Hao-Kuen, Marczyk Michał, Rios-Hoyo Alejandro, Campos Gerson Espinoza, Shan Naing Lin, Ahmed Mostafa, Umlauf Sheila, Gareiss Peter, Raaisa Raaisa: Phosphoenolpyruvate carboxykinase-2 (PCK2) is a therapeutic target in triple-negative breast cancer, Breast Cancer Research and Treatment, Springer, vol. 208, 2024, 657–671, DOI:10.1007/s10549-024-07462-z, łączna liczba autorów: 16

• Humińska-Lisowska Kinga, Zielińska Kinga, Mieszkowski Jan, Michałowska-Sawczyn Monika, Cięszczyk Paweł, Łabaj Paweł P, Wasąg Bartosz, Frączek Barbara, Grzywacz Anna, Kościółek Tomasz: Microbiome features associated with performance measures in athletic and non-athletic individuals: a case-control study, PLoS ONE, Public Library of Science, vol. 19, nr 2, 2024, Numer artykułu: e0297858, s. 1-21, DOI:10.1371/journal.pone.0297858, łączna liczba autorów: 11

• Jędrzejczyk Marta, Morabito Benedetta, Żyżyńska-Granica Barbara, Struga Marta, Janczak Jan, Aminpour Maral, Tuszyński Jacek, Huczyński Adam: Novel combretastatin A-4 analogs – design, synthesis, and antiproliferative and anti-tubulin activity, Molecules, MDPI, vol. 29, nr 10, 2024, Numer artykułu: 2200, s. 1-24, DOI:10.3390/molecules29102200

• Karwowska Zuzanna, Szczerbiak Paweł, Kościółek Tomasz: Microbiome time series data reveal predictable patterns of change, Microbiology spectrum, American Society for Microbiology, vol. 12, nr 10, 2024, Numer artykułu: e04109-23, s. 1-24, DOI:10.1128/spectrum.04109-23

• Kopera Katarzyna, Gromowski Tomasz, Wydmański Witold, Skonieczna-Żydecka Karolina, Muszyńska Agata, Zielińska Kinga, Wierzbicka-Woś Anna, Kaczmarczyk Mariusz, Kadaj-Lipka Roland, Kościółek Tomasz: Gut microbiome dynamics and predictive value in hospitalized COVID-19 patients: a comparative analysis of shallow and deep shotgun sequencing, Frontiers in Microbiology, FRONTIERS MEDIA SA, vol. 15, 2024, s. 1-13, DOI:10.3389/fmicb.2024.1342749, łączna liczba autorów: 20

• Kuliś Karolina, Tabury Kevin, Benotmane Mohammed Abderrafi, Polańska Joanna: Transcriptomic profile of mouse brain ageing in early developmental stages, Brain Sciences, Multidisciplinary Digital Publishing Institute (MDPI), vol. 14, nr 6, 2024, Numer artykułu: 581, s. 1-9, DOI:10.3390/brainsci14060581

• Lam Stephen, Wynes Murry W., Connolly Casey, Ashizawa Kazuto, Atkar-Khattra Sukhinder, Belani Chandra P., DiNatale Domenic, Henschke Claudia I., Hochhegger Bruno, Polańska Joanna: The International Association for the Study of Lung Cancer Early Lung Imaging Confederation Open-Source Deep Learning and Quantitative Measurement Initiative, Journal of Thoracic Oncology, Elsevier Science Inc., vol. 19, nr 1, 2024, s. 94-105, DOI:10.1016/j.jtho.2023.08.016, łączna liczba autorów: 30

• Marczyk Michał, Kempski Aleksander, Socha Marek, Cogiel Michał, Foszner Paweł, Staniszewski Michał: Passenger location estimation in public transport: evaluating methods and camera placement impact, IEEE Transactions on Intelligent Transportation Systems, IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC, vol. 25, nr 11, 2024, s. 17878-17887, DOI:10.1109/TITS.2024.3434746

• Nieuwenhuizen Natalie E., Nouailles Geraldine, Sutherland Jayne S., Żyła Joanna, Pasternack Arja H., Heyckendorf Jan, Frye Björn C., Höhne Kerstin, Zedler Ulrike, Bandermann Silke: Activin A levels are raised during human tuberculosis and blockade of the activin signaling axis influences murine responses to M. tuberculosis infection, mBio, AMER SOC MICROBIOLOGY, vol. 15, nr 3, 2024, s. 1-21, DOI:10.1128/mbio.03408-23, łączna liczba autorów: 19

• Niraula Dipesh, El Naqa Issam, Tuszyński Jacek, Gatenby Robert A.: Modeling non-genetic information dynamics in cells using reservoir computing, iScience, Elsevier, vol. 27, nr 4, 2024, Numer artykułu: 109614, s. 1-19, DOI:10.1016/j.isci.2024.109614

• Nishiyama Akihiro, Tanaka Shigenori, Tuszyński Jacek, Tsenkova Roumiana: Holographic brain theory: super-radiance, memory capacity and control theory, International Journal of Molecular Sciences, MDPI, vol. 25, nr 4, 2024, Numer artykułu: 2399, s. 1-25, DOI:10.3390/ijms25042399

• Nishiyama Akihiro, Tanaka Shigenori, Tuszyński Jacek: Non-equilibrium quantum brain dynamics: water coupled with phonons and photons, Entropy, MDPIAG, vol. 26, nr 11, 2024, Numer artykułu: 981, s. 1-50, DOI:10.3390/e26110981

• Nishiyama Akihiro, Tanaka Shigenori, Tuszyński Jack A.: Quantum brain dynamics and virtual reality, BioSystems, Elsevier, vol. 242, 2024, Numer artykułu: 105259, s. 1-11, DOI:10.1016/j.biosystems.2024.105259

• O’Brien Gráinne, Cecotka Agnieszka, Manola Kalliopi N., Pagoni Maria N., Polańska Joanna, Badie Christophe: Epigenetic signature of ionizing radiation in therapy-related AML patients, Heliyon, Elsevier Ltd, vol. 10, nr 1, 2024, Numer artykułu: e23244, DOI:10.1016/j.heliyon.2023.e23244

• O’Brien Gráinne, Kamuda Malgorzata, Cruz-Garcia Lourdes, Polozova Mariia, Tichy Ales, Markova Marketa, Sirak Igor, Zahradnicek Oldrich, Widłak Piotr, Polańska Joanna: Transcriptional inflammatory signature in healthy donors and different radiotherapy cancer patients, International Journal of Molecular Sciences, MDPI, vol. 25, nr 2, 2024, Numer artykułu: 1080, s. 1-15, DOI:10.3390/ijms25021080, łączna liczba autorów: 12

• Paladini Serena, Truglia Barbara, Shankar Karthik, Tuszyński Jacek: Measurement and characterization of the electrical properties of actin filaments, International Journal of Molecular Sciences, MDPI, vol. 25, nr 10, 2024, Numer artykułu: 5485, s. 1-17, DOI:10.3390/ijms25105485

• Papież Anna, Pioch Jonathan, Mollenkopf Hans-Joachim, Corleis Björn, Dorhoi Anca, Polańska Joanna: Relative effect size-based profiles as an alternative to differentiation analysis in multi-species single-cell transcriptional studies, PLoS ONE, Public Library of Science, vol. 19, nr 6, 2024, Numer artykułu: e0305874, s. 1-15, DOI:10.1371/journal.pone.0305874

• Pozzati Giulia, Zhou Jinrui, Hazan Hananel, Klement Giannoula Lakka, Siegelmann Hava T., Tuszyński Jacek, Rietman Edward A.: A systems biology analysis of chronic lymphocytic leukemia, Onco, vol. 4, nr 3, 2024, s. 163-191, DOI:10.3390/onco4030013

• Seget S., Chobot A., Bielawska A., Rusak E., Polańska Joanna, Jarosz-Chobot P.: Glycemic control in preschool children with type 1 diabetes treated with the advanced hybrid closed loop system remains stable – 2-years prospective, observational, two-center study, Hormone Research in Paediatrics, vol. 97, nr Suppl. 2, 2024, Numer artykułu: P-314, s. 239-239, DOI:10.1159/000541195

• Seget Sebastian, Chobot Agata, Tarasiewicz Mateusz, Bielawska Anna, Rusak Ewa, Ochab Agnieszka, Polańska Joanna, Jarosz-Chobot Przemysława: Glycemic control in children with type 1 diabetes treated with the advanced hybrid closed loop system 2-year prospective, observational, two-center study, Frontiers in Endocrinology, Frontiers Editorial Office, vol. 15, 2024, s. 1-6, DOI:10.3389/fendo.2024.1332418

• Seget Sebastian, Chobot Agata, Rusak Ewa, Ochab Agnieszka, Bielawska Anna, Polańska Joanna, Jarosz-Chobot Przemysława: MiniMed 780GTM in children with type 1 diabetes under seven years of age: Prospective open-label, single-arm, double-center, follow-up study, Technology and Health Care, IOS Press, vol. 32, nr 3, 2024, s. 1463-1472, DOI:10.3233/thc-230490

• Strzoda Tomasz, Cruz-Garcia Lourdes, Najim Mustafa, Badie Christophe, Polańska Joanna: A mapping-free natural language processing-based technique for sequence search in nanopore long-reads, BMC Bioinformatics, Springer, vol. 25, nr 1, 2024, Numer artykułu: 354, DOI:10.1186/s12859-024-05980-7

• Sura Gloria H., Tran Kevin, Trevarton Alexander J., Marczyk Michał, Fu Chunxiao, Du Lili, Qu Jiaxin, Lau Rosanna, Tasto Amy, Gould Rebekah E.: Comparative analysis of Ficoll-Hypaque and CytoLyt® techniques for blood removal in breast cancer malignant effusions: effects on RNA quality and sequencing outcomes, Journal of the American Society of Cytopathology, Elsevier BV, vol. 14, nr 2, 2024, s. 91-101, DOI:10.1016/j.jasc.2024.11.001, łączna liczba autorów: 15

• Szaleniec Joanna, Bezshapkin Valentyn, Krawczyk Agnieszka, Kopera Katarzyna, Zapała Barbara, Gosiewski Tomasz, Kościółek Tomasz: Determinants of the microbiome spatial variability in chronic rhinosinusitis, Rhinology, International Rhinologic Society, vol. 62, nr 1, 2024, s. 119-126, DOI:10.4193/rhin22.423

• Szydlowski Lukasz M., Bulbul Alper A., Simpson Anna C., Kaya Deniz E., Singh Nitin K., Sezerman Ugur O., Łabaj Paweł P., Kościółek Tomasz, Venkateswaran Kasthuri: Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis, Microbiome, vol. 12, nr 1, 2024, Numer artykułu: 190, s. 1-17, DOI:10.1186/s40168-024-01916-8

• Truglia Barbara, Carbone Nicola, Ghadre Ibrahim, Vallero Sara, Zito Marinella, Zizzi Eric Adriano, Deriu Marco Agostino, Tuszyński Jacek: An in silico investigation of the molecular interactions between volatile anesthetics and actin, Pharmaceuticals, Multidisciplinary Digital Publishing Institute (MDPI), vol. 17, nr 1, 2024, Numer artykułu: 37, s. 1-19, DOI:10.3390/ph17010037

• Vottero Paola, Olivetti Elena Carlotta, D’Agostino Lucia Chiara, Grazia Luca Di, Vezzetti Enrico, Aminpour Maral, Tuszyński Jacek, Marcolin Federica: Understanding the contagiousness of Covid-19 strains: a geometric approach, Journal of Molecular Graphics & Modelling, vol. 126, 2024, Numer artykułu: 108670, DOI:10.1016/j.jmgm.2023.108670

• Zamojski Dawid, Gogler Agnieszka, Scieglinska Dorota, Marczyk Michał: EpidermaQuant: unsupervised detection and quantification of epidermal differentiation markers on H-DAB-stained images of reconstructed human epidermis, Diagnostics, MDPI, vol. 14, nr 17, 2024, Numer artykułu: 1904, s. 1-15, DOI:10.3390/diagnostics14171904

• Żyła Joanna, Tobiasz Joanna, Mika Justyna, Łabaj Paweł P., Gruca Aleksandra: Advancements in bioinformatics and computational biology: 15th annual Polish Bioinformatic Society Symposium, Bioinformatics Advances, Oxford University Press, vol. 4, nr 1, 2024, Numer artykułu: vbad187, s. 1-4, DOI:10.1093/bioadv/vbad187

• Żyła Joanna, Marczyk Michał, Prażuch Wojciech, Sitkiewicz Magdalena, Durawa Agata, Jelitto Malgorzata, Dziadziuszko Katarzyna, Jelonek Karol, Kurczyk Agata, Polańska Joanna: Combining low-dose computer-tomography-based radiomics and serum metabolomics for diagnosis of malignant nodules in participants of lung cancer screening studies, Biomolecules, Multidisciplinary Digital Publishing Institute (MDPI), vol. 14, nr 1, 2024, Numer artykułu: 44, s. 1-12, DOI:10.3390/biom14010044, łączna liczba autorów: 13

• Żyła Joanna, Dziadziuszko Rafal, Marczyk Michał, Sitkiewicz Magdalena, Szczepanowska Magdalena, Bottoni Edoardo, Veronesi Giulia, Rzyman Witold, Polańska Joanna, Widlak Piotr: miR122 and miR21 are stable components of miRNA signatures of early lung cancer after validation in three independent cohorts, Journal of Molecular Diagnostics, Elsevier, vol. 26, nr 1, 2024, s. 37-48, DOI:10.1016/j.jmoldx.2023.09.010

• Kalisz Seweryn, Marczyk Michał, Polańska Joanna, Fagas Rafał: Media-Text: a media industry-based dataset for scene text detection, W: Modelling and simulation 2024. The 2024 European Simulation and Modelling Conference / Graña Manuel , Nuñez-Gonzalez J. David (red.), 2024, EUROSIS-ETI , ISBN 9789492859334, s. 138-144

• Strzoda Tomasz, Polańska Joanna, Cruz-Garcia Lourdes, Najim Mustafa, Badie Christophe: In search of a sequence classifier for a system employing NLP encoding, W: Modelling and simulation 2024. The 2024 European Simulation and Modelling Conference / Graña Manuel , Nuñez-Gonzalez J. David (red.), 2024, EUROSIS-ETI , ISBN 9789492859334, s. 84-89

• Strzoda Tomasz: Przetwarzanie języka naturalnego w sekwencjach nukleotydów, 2024, IX Międzynarodowa Interdyscyplinarna Konferencja Uczelni Technicznych InterTechDOC’24 2024, referat wygłoszony

• Zamojski Dawid: A role of Heat Shock Protein A2 in the human epidermis, 2024, X Warszawska Konferencja Onkologiczna 2024, prezentacja

• Mika Justyna, Polańska Alicja, Marczyk Michał: Evaluation of diversity indices for TCR repertoire profiling, P255, 2024, 23rd European Conference on Computational Biology 2024, poster

• Tobiasz Joanna, Polańska Joanna: Proteomic-based subtyping of breast cancer reveals novel subpopulations with different survival outcomes, P257, 2024, 23rd European Conference on Computational Biology 2024, poster