dr inż. Agata Wilk
Assistant Professor at Department of Systems Biology and Engineering
Contact details
e-mail: agata.wilk@polsl.pl
Gliwice, street Akademicka 16
telephone: 32 2371708
room: 624a
Centrum Biotechnologii
Gliwice, street Krzywoustego 8
telephone: 32 2372693
room: H 1.08
schedule
Publication
Silesian University of Technology-A knowledge and research potential platform
ORCID:0000-0001-7554-1803
Profil Scopus
Researchgate
Biography:
- 10.2015- 2019 Full-time 1nd degree studies in the field of Biotechnology, specialization Bioinformatics, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology.
thesis topic: " Implementation of chosen methods of feature selection, classification and aggregation of biomedical data", supervisor: prof. dr hab. inż. Krzysztof Fujarewicz.
- 03.2019-2020 Full-time 2nd degree studies in the field of Biotechnology, specialization Bioinformatics, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology.
thesis topic: "Modelling of RNA interference phenomenon", supervisor: prof. dr hab. inż. Krzysztof Fujarewicz. Eng. Master of Engineering with honors.
- Since September 2020 – bioinformatician, Department of Biostatistics and Bioinformatics, Maria Sklodowska-Curie National Research Institute of Oncology, Gliwice Branch
- 10.2020-10.2024 Full-time doctoral studies, discipline: Biomedical Engineering, Doctoral School, Silesian University of Technology.
doctoral dissertation: "Development of new deep learning algorithms for complex hybrid systems for the purpose of biomedical systems modeling", supervisor: prof. dr hab. inż. Krzysztof Fujarewicz.
Research:
- Mathematical modeling of biomedical systems with particular Focus on individualized modelling
- Application of artificial intelligence and machine learning for diagnostics and prognostics, biomarker search
- Use of high-throughput data for investigation of molecular mechanisms
Educational activity:
Teaching classes:
- Metody sztucznej inteligencji (Automatyka i Robotyka)
- Classifiers (Cognitive Technologies)
- Classification (Makro)
- Sztuczna Inteligencja i Sieci Neuronowe (Biotechnologia)
Projects:
- Od 2021 PhD scholarship, OPUS (NCN): Machine learning, bio-modeling and medical image processing in prediction of metastases in lung cancer, Project manager: Prof dr hab inż Andrzej Świerniak
- STRATEGMED (NCBiR): Molecular diagnostic and imaging in individualized therapy for breast, thyroid and prostate cancer (MILESTONE), project manager (SUT): Prof. dr hab. inż. Krzysztof Fujarewicz
- STRATEGMED (NCBiR): Development of modern biomarkers and development of an innovative FGFR kinases inhibitor (CELONKO), project manager (NRIO): prof. dr hab. Katarzyna Lisowska
- OPUS (NCN): Role of HSPA2 chaperone protein in epidermis physiology and pathophysiology, project manager: dr hab. Dorota Ścieglińska, prof. NIO
International Cooperation:
August-October 2022 – internship in German Cancer Research Center (DKFZ) in Heidelberg, Computational Cancer Epigenomics Group
Awards and Fellowships
- 2022 – Helmholtz Visiting Researcher Grant
- 2020, 2021 – grant for best PhD students
- 2020 – medal Omnium Studiosorum Optimo – Best among students
- 2020 – laureate, National English Language Olympiad for Technical University Students
- 2019 – II place laureate – Skyhacks, biggest AI hackathon in Poland
Organizational activity:
- Member of the Organizing Committee - XXVII Krajowa Konferencja Zastosowań Matematyki w Biologii i Medycynie
